Pseudomonas aeruginosa PAO1, PA0076 (tagF1)

Cytoplasmic Membrane
Outer Membrane
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class


Database Xref Pathway Version Evidence PMID
PseudoCAP Hcp secretion island I (HSI-I) type VI secretion system ECO:0000037
KEGG pae02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.1730.10 pa0076 domain IPR038225 T6S-associated protein TagF superfamily 1 226 1.7E-86
Pfam PF09867 TagF N-terminal domain, Type VI secretion system-associated IPR017748 T6S-associated protein TagF 5 139 1.5E-48
NCBIfam TIGR03373 JCVI: type VI secretion system-associated protein TagF IPR017748 T6S-associated protein TagF 5 139 4.5E-48
PIRSF PIRSF029287 UCP029287 IPR017748 T6S-associated protein TagF 1 219 1.2E-98

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.