Pseudomonas aeruginosa PAO1, PA0690 (pdtA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0098046 | type V protein secretion system complex | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
25009238 | Reviewed by curator |
| Biological Process | GO:0009405 | pathogenesis | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
25009238 | Reviewed by curator |
| Biological Process | GO:0046819 | protein secretion by the type V secretion system | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
25009238 | Reviewed by curator |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF12545 | Filamentous haemagglutinin family outer membrane protein | IPR021026 | Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739 | 3971 | 4080 | 4.8E-39 |
| Coils | Coil | Coil | - | - | 75 | 102 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 4134 | 4154 | - |
| Gene3D | G3DSA:2.160.20.10 | - | IPR012334 | Pectin lyase fold | 139 | 452 | 6.6E-53 |
| PANTHER | PTHR12338 | AUTOTRANSPORTER | - | - | 41 | 4179 | 0.0 |
| SMART | SM00912 | Haemagg_act_2a | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 132 | 248 | 2.6E-29 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 55 | 77 | - |
| SUPERFAMILY | SSF51126 | Pectin lyase-like | IPR011050 | Pectin lyase fold/virulence factor | 145 | 480 | 1.29E-36 |
| NCBIfam | TIGR01901 | JCVI: filamentous hemagglutinin family N-terminal domain | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 169 | 245 | 3.8E-20 |
| Pfam | PF05860 | TPS secretion domain | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 135 | 382 | 2.7E-43 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.