Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00989
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
CDD | cd00130 | PAS | IPR000014 | PAS domain | 254 | 360 | 1.08427E-9 |
FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 369 | 537 | 3.3E-47 |
SMART | SM00091 | pas_2 | IPR000014 | PAS domain | 245 | 311 | 3.4E-7 |
Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 374 | 531 | 3.4E-45 |
CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 375 | 533 | 1.67745E-61 |
Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 364 | 537 | 4.1E-57 |
SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 363 | 535 | 5.3E-64 |
SUPERFAMILY | SSF141868 | EAL domain-like | IPR035919 | EAL domain superfamily | 553 | 796 | 4.84E-73 |
Pfam | PF00563 | EAL domain | IPR001633 | EAL domain | 554 | 792 | 6.8E-61 |
CDD | cd01948 | EAL | IPR001633 | EAL domain | 553 | 797 | 3.5963E-86 |
SMART | SM00052 | duf2_2 | IPR001633 | EAL domain | 547 | 797 | 2.6E-69 |
Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 233 | 361 | 5.4E-19 |
SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 379 | 537 | 1.8E-49 |
SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | IPR035965 | PAS domain superfamily | 232 | 361 | 1.1E-17 |
Pfam | PF00989 | PAS fold | IPR013767 | PAS fold | 251 | 360 | 4.5E-11 |
Gene3D | G3DSA:3.20.20.450 | EAL domain | IPR035919 | EAL domain superfamily | 549 | 799 | 8.2E-83 |
NCBIfam | TIGR00229 | JCVI: PAS domain S-box protein | IPR000014 | PAS domain | 251 | 369 | 2.8E-13 |
PANTHER | PTHR33121 | CYCLIC DI-GMP PHOSPHODIESTERASE PDEF | - | - | 48 | 794 | 0.0 |
NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 370 | 534 | 1.0E-43 |