Pseudomonas aeruginosa PAO1, PA1247 (aprE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0046903 secretion
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 1427098 Reviewed by curator
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01843
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00529
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015031 protein transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01843
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Secreted Factors (toxins, enzymes, alginate) Other PAO1 genes in this class
Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Apr type I secretion system ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 296 317 7.0E-63
Gene3D G3DSA:2.40.50.100 - - - 54 124 6.6E-6
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 396 411 7.0E-63
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 21 44 7.0E-63
Coils Coil Coil - - 149 176 -
Gene3D G3DSA:2.40.30.170 - - - 304 414 4.7E-7
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 329 353 7.0E-63
Pfam PF00529 Cation efflux system protein CusB domain 1 IPR043602 Cation efflux system protein CusB, domain 1 23 388 2.1E-20
NCBIfam TIGR01843 JCVI: HlyD family type I secretion periplasmic adaptor subunit IPR010129 Type I secretion membrane fusion protein, HlyD family 12 431 3.2E-121
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 63 83 7.0E-63
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 353 376 7.0E-63
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 411 431 7.0E-63
PANTHER PTHR30386 MEMBRANE FUSION SUBUNIT OF EMRAB-TOLC MULTIDRUG EFFLUX PUMP - - 10 426 3.7E-80
Coils Coil Coil - - 208 228 -
SUPERFAMILY SSF111369 HlyD-like secretion proteins - - 54 111 3.01E-6
Coils Coil Coil - - 92 112 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.