Pseudomonas aeruginosa PAO1, PA3140

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00278	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006281	DNA repair	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00278	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00278	HhH1_4	IPR003583	Helix-hairpin-helix DNA-binding motif, class 1	86	105	20.0
SUPERFAMILY	SSF47781	RuvA domain 2-like	IPR010994	RuvA domain 2-like	34	107	4.78E-24
TIGRFAM	TIGR00426	TIGR00426: competence protein ComEA helix-hairpin-helix repeat region	IPR004509	Competence protein ComEA, helix-hairpin-helix domain	44	108	9.1E-21
SMART	SM00278	HhH1_4	IPR003583	Helix-hairpin-helix DNA-binding motif, class 1	56	75	2.7
Pfam	PF12836	Helix-hairpin-helix motif	-	-	44	106	8.5E-20
PANTHER	PTHR21180:SF32	ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY DOMAIN-CONTAINING PROTEIN 1	-	-	21	108	5.4E-21
Gene3D	G3DSA:1.10.150.320	Photosystem II 12 kDa extrinsic protein	-	-	28	106	7.5E-17
PANTHER	PTHR21180	ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY DOMAIN-CONTAINING PROTEIN 1	-	-	21	108	5.4E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.