Pseudomonas aeruginosa PAO1, PA3604 (erdR)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0000156	phosphorelay response regulator activity	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	20093290	Reviewed by curator
Biological Process	GO:1900065	regulation of ethanol catabolic process	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	20093290	Reviewed by curator
Molecular Function	GO:0000156	phosphorelay response regulator activity	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	20093290	Reviewed by curator
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06170	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00072	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other PAO1 genes in this class Transcriptional regulators Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
PseudoCAP		Two-component System		ECO:0000037 not_recorded
PseudoCAP		ethanol oxidation pathway		ECO:0000037 not_recorded

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	167	183	4.5E-11
Gene3D	G3DSA:3.40.50.2300	-	-	-	5	212	4.0E-52
Pfam	PF00196	Bacterial regulatory proteins, luxR family	IPR000792	Transcription regulator LuxR, C-terminal	152	206	4.9E-19
SMART	SM00421	luxrmega5	IPR000792	Transcription regulator LuxR, C-terminal	150	207	1.1E-23
SUPERFAMILY	SSF52172	CheY-like	IPR011006	CheY-like superfamily	3	180	5.69E-26
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	153	167	4.5E-11
Pfam	PF00072	Response regulator receiver domain	IPR001789	Signal transduction response regulator, receiver domain	6	120	8.6E-22
PANTHER	PTHR45566	HTH-TYPE TRANSCRIPTIONAL REGULATOR YHJB-RELATED	-	-	2	213	6.1E-65
CDD	cd06170	LuxR_C_like	IPR000792	Transcription regulator LuxR, C-terminal	153	206	3.98551E-18
CDD	cd17535	REC_NarL-like	-	-	6	123	8.33352E-38
FunFam	G3DSA:3.40.50.2300:FF:000179	Transcriptional regulator, LuxR family	-	-	5	211	2.1E-110
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	183	195	4.5E-11
SMART	SM00448	REC_2	IPR001789	Signal transduction response regulator, receiver domain	4	119	2.2E-19

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.