Pseudomonas aeruginosa PAO1, PA3687 (ppc)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006091 generation of precursor metabolites and energy
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0015977 carbon fixation
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0008152 metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0006090 pyruvate metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0019643 reductive tricarboxylic acid cycle
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0008964 phosphoenolpyruvate carboxylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF51621
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015977 carbon fixation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006099 tricarboxylic acid cycle
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Central intermediary metabolism Other PAO1 genes in this class
Energy metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc formaldehyde assimilation I (serine pathway) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pae00620 Pyruvate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc C4 photosynthetic carbon assimilation cycle, NADP-ME type InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc C4 photosynthetic carbon assimilation cycle, NAD-ME type InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc P22-PWY acetyl-CoA assimilation 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae00680 Methane metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc FERMENTATION-PWY mixed acid fermentation 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
MetaCyc L-glutamine biosynthesis III InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc ethylene biosynthesis V (engineered) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
PseudoCAP Reductive carboxylate cycle (CO2 fixation) ECO:0000037
not_recorded
MetaCyc <i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
PseudoCAP Pyruvate metabolism ECO:0000037
not_recorded
PseudoCyc P106-PWY serine-isocitrate lyase pathway 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
PseudoCyc ANARESP1-PWY anaerobic respiration 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
MetaCyc partial TCA cycle (obligate autotrophs) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
PseudoCAP Carbon fixation ECO:0000037
not_recorded
MetaCyc C4 photosynthetic carbon assimilation cycle, PEPCK type InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00150 Phosphoenolpyruvate carboxylase signature IPR021135 Phosphoenolpyruvate carboxylase 135 148 8.9E-69
Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type 1 878 18.767492
PRINTS PR00150 Phosphoenolpyruvate carboxylase signature IPR021135 Phosphoenolpyruvate carboxylase 385 405 8.9E-69
SUPERFAMILY SSF51621 Phosphoenolpyruvate/pyruvate domain IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily 5 878 0.0
Pfam PF00311 Phosphoenolpyruvate carboxylase IPR021135 Phosphoenolpyruvate carboxylase 8 878 0.0
Coils Coil Coil - - 762 782 -
PRINTS PR00150 Phosphoenolpyruvate carboxylase signature IPR021135 Phosphoenolpyruvate carboxylase 247 262 8.9E-69
PRINTS PR00150 Phosphoenolpyruvate carboxylase signature IPR021135 Phosphoenolpyruvate carboxylase 534 554 8.9E-69
Gene3D G3DSA:1.20.1440.90 Phosphoenolpyruvate/pyruvate domain - - 275 387 4.4E-28
PRINTS PR00150 Phosphoenolpyruvate carboxylase signature IPR021135 Phosphoenolpyruvate carboxylase 576 605 8.9E-69
PANTHER PTHR30523 PHOSPHOENOLPYRUVATE CARBOXYLASE IPR021135 Phosphoenolpyruvate carboxylase 5 878 0.0
PRINTS PR00150 Phosphoenolpyruvate carboxylase signature IPR021135 Phosphoenolpyruvate carboxylase 188 204 8.9E-69
PRINTS PR00150 Phosphoenolpyruvate carboxylase signature IPR021135 Phosphoenolpyruvate carboxylase 707 733 8.9E-69

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.