Pseudomonas aeruginosa PAO1, PA3742 (rplS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0044391 ribosomal subunit
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 6423642 Reviewed by curator
Biological Process GO:0044267 cellular protein metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae03010 Ribosome 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF50104 Translation proteins SH3-like domain IPR008991 Translation protein SH3-like domain superfamily 2 114 2.61E-45
PRINTS PR00061 Ribosomal protein L19 signature IPR001857 Large ribosomal subunit protein bL19 5 34 6.6E-41
Hamap MF_00402 50S ribosomal protein L19 [rplS]. IPR001857 Large ribosomal subunit protein bL19 3 115 29.920401
FunFam G3DSA:2.30.30.790:FF:000001 50S ribosomal protein L19 - - 2 116 7.1E-55
Gene3D G3DSA:2.30.30.790 - IPR038657 Large ribosomal subunit protein bL19 superfamily 1 116 2.6E-33
PIRSF PIRSF002191 Ribosomal_L19 IPR001857 Large ribosomal subunit protein bL19 1 116 8.0E-49
PRINTS PR00061 Ribosomal protein L19 signature IPR001857 Large ribosomal subunit protein bL19 89 114 6.6E-41
PRINTS PR00061 Ribosomal protein L19 signature IPR001857 Large ribosomal subunit protein bL19 35 64 6.6E-41
PANTHER PTHR15680 RIBOSOMAL PROTEIN L19 IPR001857 Large ribosomal subunit protein bL19 3 113 5.8E-34
Pfam PF01245 Ribosomal protein L19 IPR001857 Large ribosomal subunit protein bL19 5 114 1.3E-49
NCBIfam TIGR01024 JCVI: 50S ribosomal protein L19 IPR001857 Large ribosomal subunit protein bL19 4 114 1.3E-49

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.