Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3779
|
Name |
|
Replicon | chromosome |
Genomic location | 4237693 - 4238733 (+ strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 3 transposon mutants in orthologs |
Comment | Structural similarity to 4P47 (TRAP periplasmic solute binding protein from Ochrobactrum anthropi, root-mean-square deviation: 1.2 angstroms). Sequence similarity to 4N8G (98%/63,99%) (DAL). Final predicted ligand: dipeptide (PMID: 31631799) |
RefSeq | NP_252468.1 |
GI | 15598974 |
Affymetrix | PA3779_at |
Entrez | 879148 |
GenBank | AAG07166.1 |
INSDC | AAG07166.1 |
NCBI Locus Tag | PA3779 |
protein_id(GenBank) | gb|AAG07166.1|AE004797_1|gnl|PseudoCAP|PA3779 |
TIGR | NTL03PA03779 |
UniParc | UPI00000C5B0A |
UniProtKB Acc | Q9HXL6 |
UniProtKB ID | Q9HXL6_PSEAE |
UniRef100 | UniRef100_Q9HXL6 |
UniRef50 | UniRef50_Q9HXL6 |
UniRef90 | UniRef90_Q9HXL6 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
putative periplasmic substrate binding protein
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected by MALDI-TOF/TOF (PMID:19333994).
|
Charge (pH 7) | -5.03 |
Kyte-Doolittle Hydrophobicity Value | -0.180 |
Molecular Weight (kDa) | 37.7 |
Isoelectric Point (pI) | 5.25 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 245 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000851 (1023 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3779
Search term: putative periplasmic substrate binding protein
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|
Uncovering the structure and function of Pseudomonas aeruginosa periplasmic proteins by an in silico approach.
Caprari S, Brandi V, Pasquadibisceglie A, Polticelli F
J Biomol Struct Dyn 2020 Sep;38(15):4508-4520
PubMed ID: 31631799
|