Pseudomonas aeruginosa PAO1, PA5431

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07377
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07377
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.640.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00155
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00155
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00155 Aminotransferase class I and II IPR004839 Aminotransferase, class I/classII 149 391 1.2E-15
CDD cd07377 WHTH_GntR IPR000524 Transcription regulator HTH, GntR 20 84 4.18845E-20
SUPERFAMILY SSF53383 IPR015424 Pyridoxal phosphate-dependent transferase 119 480 3.46E-85
SMART SM00345 IPR000524 Transcription regulator HTH, GntR 24 83 5.4E-13
CDD cd00609 AAT_like 120 369 8.86922E-54
Gene3D G3DSA:3.40.640.10 IPR015421 Pyridoxal phosphate-dependent transferase, major domain 114 473 1.9E-120
ProSiteProfiles PS50949 GntR-type HTH domain profile. IPR000524 Transcription regulator HTH, GntR 18 86 20.801
PRINTS PR00035 GntR bacterial regulatory protein HTH signature IPR000524 Transcription regulator HTH, GntR 57 73 6.5E-7
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 15 92 2.4E-19
PRINTS PR00035 GntR bacterial regulatory protein HTH signature IPR000524 Transcription regulator HTH, GntR 43 57 6.5E-7
Pfam PF00392 Bacterial regulatory proteins, gntR family IPR000524 Transcription regulator HTH, GntR 20 83 7.9E-16
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 12 90 6.3E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.