Pseudomonas aeruginosa PAO1, PA5562 (spoOJ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00180
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM00470 | ParB_7 | IPR003115 | ParB/Sulfiredoxin | 37 | 127 | 5.3E-39 |
| Coils | Coil | Coil | - | - | 141 | 161 | - |
| NCBIfam | TIGR00180 | JCVI: ParB/RepB/Spo0J family partition protein | IPR004437 | ParB/RepB/Spo0J partition protein | 34 | 204 | 2.4E-63 |
| Gene3D | G3DSA:1.10.10.2830 | - | - | - | 114 | 226 | 1.8E-35 |
| FunFam | G3DSA:1.10.10.2830:FF:000001 | Chromosome partitioning protein ParB | - | - | 114 | 226 | 2.3E-40 |
| Pfam | PF02195 | ParB/Sulfiredoxin domain | IPR003115 | ParB/Sulfiredoxin | 38 | 127 | 1.8E-30 |
| CDD | cd16393 | SPO0J_N | - | - | 36 | 132 | 3.15992E-52 |
| PANTHER | PTHR33375 | CHROMOSOME-PARTITIONING PROTEIN PARB-RELATED | - | - | 10 | 289 | 2.1E-82 |
| Gene3D | G3DSA:3.90.1530.30 | - | - | - | 50 | 113 | 3.0E-27 |
| Pfam | PF17762 | HTH domain found in ParB protein | IPR041468 | ParB/Spo0J, HTH domain | 177 | 227 | 2.5E-17 |
| SUPERFAMILY | SSF110849 | ParB/Sulfiredoxin | IPR036086 | ParB/Sulfiredoxin superfamily | 36 | 180 | 1.2E-34 |
| FunFam | G3DSA:3.90.1530.30:FF:000001 | Chromosome partitioning protein ParB | - | - | 50 | 112 | 7.6E-30 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.