Pseudomonas syringae pv. syringae B728a, Psyr_1889
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 162 | 181 | - |
| Pfam | PF14891 | Effector protein | IPR028208 | Effector protein NleD-like | 18 | 214 | 1.5E-37 |
| NCBIfam | NF041347 | NCBIFAM: XopG/HopH/AvrPtoH family type III secretion system effector | - | - | 7 | 211 | 1.0E-78 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 195 | 218 | - |
| Gene3D | G3DSA:3.90.1240.10 | Metalloproteases ("zincins"), catalytic domain like | - | - | 19 | 187 | 1.2E-6 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.