Pseudomonas aeruginosa UCBPP-PA14, PA14_03790
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR00229 | JCVI: PAS domain S-box protein | IPR000014 | PAS domain | 29 | 158 | 1.9E-13 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 157 | 322 | 2.1E-55 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 41 | 156 | 1.5E-25 |
| CDD | cd00130 | PAS | IPR000014 | PAS domain | 55 | 148 | 1.70199E-7 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 157 | 322 | 7.7E-49 |
| SMART | SM00086 | pac_2 | IPR001610 | PAC motif | 108 | 151 | 4.3E-5 |
| SMART | SM00091 | pas_2 | IPR000014 | PAS domain | 33 | 102 | 0.0022 |
| FunFam | G3DSA:3.30.450.20:FF:000212 | Diguanylate cyclase | - | - | 28 | 148 | 1.3E-54 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 167 | 322 | 4.71E-46 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | IPR035965 | PAS domain superfamily | 39 | 153 | 1.21E-18 |
| PANTHER | PTHR46663 | DIGUANYLATE CYCLASE DGCT-RELATED | - | - | 30 | 322 | 1.2E-61 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 158 | 321 | 4.6E-43 |
| Pfam | PF08447 | PAS fold | IPR013655 | PAS fold-3 | 57 | 145 | 3.5E-18 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 151 | 323 | 6.4E-52 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 162 | 318 | 2.3E-44 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 163 | 321 | 3.13467E-61 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.