Pseudomonas aeruginosa UCBPP-PA14, PA14_04190

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00850 Histone deacetylase domain IPR023801 Histone deacetylase domain 28 336 4.1E-63
Gene3D G3DSA:3.40.800.20 Histone deacetylase domain IPR037138 Histone deacetylase domain superfamily 1 343 1.9E-123
SUPERFAMILY SSF52768 Arginase/deacetylase IPR023696 Ureohydrolase domain superfamily 2 341 1.1E-85
FunFam G3DSA:3.40.800.20:FF:000032 Acetylpolyamine amidohydrolase 2 - - 1 343 0.0
PANTHER PTHR48252 HISTONE DEACETYLASE 2-RELATED - - 24 328 2.1E-50
CDD cd10001 HDAC_classII_APAH - - 2 340 0.0
PRINTS PR01270 Histone deacetylase superfamily signature IPR000286 Histone deacetylase family 188 203 1.3E-12
PRINTS PR01270 Histone deacetylase superfamily signature IPR000286 Histone deacetylase family 274 284 1.3E-12
PRINTS PR01270 Histone deacetylase superfamily signature IPR000286 Histone deacetylase family 155 178 1.3E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.