Pseudomonas aeruginosa UCBPP-PA14, PA14_04860

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008168 methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF004553
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.50.150
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0031167 rRNA methylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF004553
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00095 JCVI: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD IPR004398 RNA methyltransferase, RsmD 14 196 3.8E-50
PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature - - 62 76 9.5E-6
PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature - - 37 53 9.5E-6
PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature - - 128 140 9.5E-6
Pfam PF03602 Conserved hypothetical protein 95 - - 18 195 1.7E-59
CDD cd02440 AdoMet_MTases - - 61 155 2.0713E-11
PANTHER PTHR43542 METHYLTRANSFERASE IPR004398 RNA methyltransferase, RsmD 11 196 1.2E-43
PIRSF PIRSF004553 Methylase_YhhF IPR004398 RNA methyltransferase, RsmD 17 198 4.5E-48
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 9 198 6.2E-58
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 18 195 1.67E-49

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.