Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003735 | structural constituent of ribosome |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01315
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003676 | nucleic acid binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF46946
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006412 | translation |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01315
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003723 | RNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01315
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Cellular Component | GO:0005840 | ribosome |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01315
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | pau03010 | Ribosome | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:1.10.8.50 | - | - | - | 1 | 71 | 2.9E-29 |
PANTHER | PTHR10871 | 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 | - | - | 2 | 110 | 8.4E-28 |
NCBIfam | TIGR03631 | JCVI: 30S ribosomal protein S13 | IPR019980 | Small ribosomal subunit protein uS13, bacterial-type | 3 | 114 | 1.5E-54 |
SUPERFAMILY | SSF46946 | S13-like H2TH domain | IPR010979 | Small ribosomal subunit protein uS13-like, H2TH | 2 | 114 | 3.01E-48 |
FunFam | G3DSA:4.10.910.10:FF:000001 | 30S ribosomal protein S13 | - | - | 72 | 118 | 2.6E-29 |
Pfam | PF00416 | Ribosomal protein S13/S18 | IPR001892 | Small ribosomal subunit protein uS13 | 3 | 108 | 3.3E-33 |
FunFam | G3DSA:1.10.8.50:FF:000001 | 30S ribosomal protein S13 | - | - | 1 | 71 | 3.3E-31 |
Coils | Coil | Coil | - | - | 46 | 66 | - |
MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 94 | 118 | - |
Gene3D | G3DSA:4.10.910.10 | 30s ribosomal protein s13, domain 2 | IPR027437 | Small ribosomal subunit protein uS13, C-terminal | 72 | 118 | 1.5E-26 |
Hamap | MF_01315 | 30S ribosomal protein S13 [rpsM]. | IPR001892 | Small ribosomal subunit protein uS13 | 1 | 118 | 27.810005 |
PIRSF | PIRSF002134 | RPS13p_RPS13a_RPS18e_RPS13o | IPR001892 | Small ribosomal subunit protein uS13 | 1 | 118 | 5.3E-44 |