Pseudomonas aeruginosa UCBPP-PA14, PA14_10370

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF56176
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF55103
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Fatty acid and phospholipid metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Bile acid biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.465.10 - IPR016169 FAD-binding, type PCMH, subdomain 2 147 273 1.3E-42
SUPERFAMILY SSF55103 FAD-linked oxidases, C-terminal domain IPR016164 FAD-linked oxidase-like, C-terminal 277 597 0.0
SUPERFAMILY SSF56176 FAD-binding/transporter-associated domain-like IPR036318 FAD-binding, type PCMH-like superfamily 62 271 7.01E-35
NCBIfam TIGR01409 JCVI: twin-arginine translocation signal domain IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal 22 54 1.4E-4
Gene3D G3DSA:3.40.462.10 - IPR016170 Cytokinin dehydrogenase, C-terminal domain superfamily 275 547 1.4E-127
PANTHER PTHR43716 D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL - - 33 587 4.6E-57
Gene3D G3DSA:3.30.43.10 - IPR016167 FAD-binding, type PCMH, subdomain 1 70 146 1.8E-30
Pfam PF01565 FAD binding domain IPR006094 FAD linked oxidase, N-terminal 92 211 2.8E-12
Gene3D G3DSA:1.10.45.10 - IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 548 597 2.0E-16
Pfam PF09129 Cholesterol oxidase, substrate-binding IPR015213 Cholesterol oxidase, substrate-binding 277 597 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.