Pseudomonas putida HB3267, B479_02340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_02340
Name
Replicon chromosome
Genomic location 553465 - 554745 (+ strand)

Cross-References

RefSeq YP_007227327.1
GI 431800424
Entrez 14286875
INSDC AGA71384.1
NCBI Locus Tag B479_02340
UniParc UPI0002A16441
UniProtKB Acc L0FC21
UniProtKB ID L0FC21_PSEPU
UniRef100 UniRef100_L0FC21
UniRef50 UniRef50_R8AN22
UniRef90 UniRef90_R9V130

Product

Feature Type CDS
Coding Frame 1
Product Name
class III aminotransferase
Synonyms
Evidence for Translation
Charge (pH 7) 3.59
Kyte-Doolittle Hydrophobicity Value -0.032
Molecular Weight (kDa) 45198.4
Isoelectric Point (pI) 7.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000514 (456 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_02340

Human Homologs

Ensembl 97, assembly GRCh38.p12
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value: 3.0e-46
Percent Identity: 35.4

References

No references are associated with this feature.