Pseudomonas aeruginosa PAO1, PA0246

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005887 integral component of plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class
Membrane proteins Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01036 Tetracycline resistance protein TetB signature 401 420 1.7E-12
SUPERFAMILY SSF103473 IPR036259 MFS transporter superfamily 8 485 7.46E-67
CDD cd17502 MFS_Azr1_MDR_like 18 421 3.08937E-110
ProSiteProfiles PS50850 Major facilitator superfamily (MFS) profile. IPR020846 Major facilitator superfamily domain 14 489 45.215
PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 1.7E-12
PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 1.7E-12
PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 1.7E-12
PRINTS PR01036 Tetracycline resistance protein TetB signature 203 221 1.7E-12
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 18 410 8.0E-55
Gene3D G3DSA:1.20.1720.10 14 227 6.3E-56
TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family IPR004638 Drug resistance transporter EmrB-like 15 419 9.7E-75

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.