Pseudomonas aeruginosa PAO1, PA0396 (pilU)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
18174131 Reviewed by curator
Biological Process GO:0043107 type IV pilus-dependent motility
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
7854122 Reviewed by curator
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01420
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Motility & Attachment Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Pilin biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR01420 pilT_fam: twitching motility protein IPR006321 Pilus retraction protein PilT 3 344 0.0
Gene3D G3DSA:3.40.50.300 101 355 3.1E-87
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 4 337 3.43E-68
Gene3D G3DSA:3.30.450.90 1 99 7.8E-31
Pfam PF00437 Type II/IV secretion system protein IPR001482 Type II/IV secretion system protein 112 269 1.7E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.