Pseudomonas aeruginosa PAO1, PA0456

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002599
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class
Adaptation, Protection Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00050 Cold shock protein signature IPR002059 Cold-shock protein, DNA-binding 26 35 1.7E-18
ProSitePatterns PS00352 Cold-shock (CSD) domain signature. IPR019844 Cold-shock (CSD) domain 17 35 -
SMART SM00357 IPR011129 Cold shock domain 5 68 3.6E-29
PRINTS PR00050 Cold shock protein signature IPR002059 Cold-shock protein, DNA-binding 41 59 1.7E-18
CDD cd04458 CSP_CDS IPR002059 Cold-shock protein, DNA-binding 4 67 9.49566E-30
SUPERFAMILY SSF50249 IPR012340 Nucleic acid-binding, OB-fold 3 68 4.41E-25
ProSiteProfiles PS51857 Cold-shock (CSD) domain profile. 3 67 34.512
PIRSF PIRSF002599 IPR012156 Cold shock, CspA 1 69 1.5E-23
Gene3D G3DSA:2.40.50.140 3 67 2.3E-29
PRINTS PR00050 Cold shock protein signature IPR002059 Cold-shock protein, DNA-binding 6 21 1.7E-18
Pfam PF00313 'Cold-shock' DNA-binding domain IPR002059 Cold-shock protein, DNA-binding 5 67 4.6E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.