Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA0518
|
Name |
nirM
|
Replicon | chromosome |
Genomic location | 578029 - 578343 (- strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
RefSeq | NP_249209.1 |
GI | 15595715 |
Affymetrix | PA0518_nirM_at |
DNASU | PaCD00006218 |
Entrez | 882220 |
GenBank | AAG03907.1 |
INSDC | AAG03907.1 |
NCBI Locus Tag | PA0518 |
protein_id(GenBank) | gb|AAG03907.1|AE004488_11|gnl|PseudoCAP|PA0518 |
TIGR | NTL03PA00519 |
UniParc | UPI0000126C4A |
UniProtKB Acc | P00099 |
UniProtKB ID | CY551_PSEAE |
UniRef100 | UniRef100_P00099 |
UniRef50 | UniRef50_P95339 |
UniRef90 | UniRef90_P00099 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
cytochrome c-551 precursor
|
Synonyms |
cytochrome c8 c551 |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 0.16 |
Kyte-Doolittle Hydrophobicity Value | -0.056 |
Molecular Weight (kDa) | 11.0 |
Isoelectric Point (pI) | 7.26 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
2EXV | ELECTRON TRANSPORT | 11/09/05 | Crystal structure of the F7A mutant of the cytochrome c551 from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 1.86 | X-RAY DIFFRACTION | 98.8 |
351C | ELECTRON TRANSPORT | 07/20/81 | STRUCTURE OF CYTOCHROME C551 FROM P. AERUGINOSA REFINED AT 1.6 ANGSTROMS RESOLUTION AND COMPARISON OF THE TWO REDOX FORMS | Pseudomonas aeruginosa | 1.6 | X-RAY DIFFRACTION | 100.0 |
3X39 | ELECTRON TRANSPORT | 01/16/15 | Domain-swapped dimer of Pseudomonas aeruginosa cytochrome c551 | Pseudomonas aeruginosa PAO1 | 1.5 | X-RAY DIFFRACTION | 100.0 |
1DVV | ELECTRON TRANSPORT | 01/22/00 | SOLUTION STRUCTURE OF THE QUINTUPLE MUTANT OF CYTOCHROME C-551 FROM PSEUDOMONAS AERUGINOSA | Pseudomonas aeruginosa | NOT | SOLUTION NMR | 93.9 |
451C | ELECTRON TRANSPORT | 07/20/81 | STRUCTURE OF CYTOCHROME C551 FROM P. AERUGINOSA REFINED AT 1.6 ANGSTROMS RESOLUTION AND COMPARISON OF THE TWO REDOX FORMS | Pseudomonas aeruginosa | 1.6 | X-RAY DIFFRACTION | 100.0 |
2PAC | ELECTRON TRANSPORT | 05/05/93 | SOLUTION STRUCTURE OF FE(II) CYTOCHROME C551 FROM PSEUDOMONAS AERUGINOSA AS DETERMINED BY TWO-DIMENSIONAL 1H NMR | Pseudomonas aeruginosa | NOT | SOLUTION NMR | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 88 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000502 (369 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA0518
Search term: nirM
Search term: cytochrome c-551 precursor
|
The structural gene for cytochrome c551 from Pseudomonas aeruginosa. The nucleotide sequence shows a location downstream of the nitrite reductase gene.
Nordling M, Young S, Karlsson BG, Lundberg LG
FEBS Lett 1990 Jan 1;259(2):230-2
PubMed ID: 2152881
|
Investigation of the structure of oxidized Pseudomonas aeruginosa cytochrome c-551 by NMR: comparison of observed paramagnetic shifts and calculated pseudocontact shifts.
Timkovich R, Cai M
Biochemistry 1993 Nov 2;32(43):11516-23
PubMed ID: 8218218
|