Pseudomonas aeruginosa PAO1, PA0773 (pdxJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0008615 pyridoxine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00559
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00559
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0033856 pyridoxine 5'-phosphate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00559
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae00750 Vitamin B6 metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ 1 248 128.389496
Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ 9 241 1.1E-102
PANTHER PTHR30456 PYRIDOXINE 5'-PHOSPHATE SYNTHASE IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ 7 244 4.1E-106
SUPERFAMILY SSF63892 Pyridoxine 5'-phosphate synthase IPR036130 Pyridoxine 5'-phosphate synthase 7 242 6.15E-97
CDD cd00003 PNPsynthase IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ 8 241 0.0
NCBIfam TIGR00559 JCVI: pyridoxine 5'-phosphate synthase IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ 9 242 4.8E-96
FunFam G3DSA:3.20.20.70:FF:000042 Pyridoxine 5'-phosphate synthase - - 4 246 7.7E-129
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 1 248 4.6E-118

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.