Pseudomonas aeruginosa PAO1, PA0889 (aotQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:1902765 L-arginine import into cell
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
18833300 Reviewed by curator
Biological Process GO:1903411 L-ornithine import into cell
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
18833300 Reviewed by curator
Biological Process GO:1902023 L-arginine transport
IGI
Inferred from Genetic Interaction
ECO:0000316
genetic interaction evidence used in manual assertion
9791103 Reviewed by curator
Biological Process GO:0015822 ornithine transport
IGI
Inferred from Genetic Interaction
ECO:0000316
genetic interaction evidence used in manual assertion
9791103 Reviewed by curator
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01726
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50928
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50928
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071705 nitrogen compound transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01726
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01726
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01726
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class
Membrane proteins Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS50928 ABC transporter integral membrane type-1 domain profile. IPR000515 ABC transporter type 1, transmembrane domain MetI-like 13 213 16.898
Gene3D G3DSA:1.10.3720.10 IPR035906 MetI-like superfamily 1 223 3.8E-49
SUPERFAMILY SSF161098 IPR035906 MetI-like superfamily 9 206 5.76E-39
CDD cd06261 TM_PBP2 IPR000515 ABC transporter type 1, transmembrane domain MetI-like 27 178 7.82364E-15
TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain 8 115 6.8E-20
Pfam PF00528 Binding-protein-dependent transport system inner membrane component IPR000515 ABC transporter type 1, transmembrane domain MetI-like 28 220 2.3E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.