Pseudomonas aeruginosa PAO1, PA0889 (aotQ)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:1902765	L-arginine import into cell	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	18833300	Reviewed by curator
Biological Process	GO:1903411	L-ornithine import into cell	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	18833300	Reviewed by curator
Biological Process	GO:1902023	L-arginine transport	IGI Inferred from Genetic Interaction	ECO:0000316 genetic interaction evidence used in manual assertion	9791103	Reviewed by curator
Biological Process	GO:0015822	ornithine transport	IGI Inferred from Genetic Interaction	ECO:0000316 genetic interaction evidence used in manual assertion	9791103	Reviewed by curator
Cellular Component	GO:0016021	integral component of membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01726	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50928	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50928	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0071705	nitrogen compound transport	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01726	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0043190	ATP-binding cassette (ABC) transporter complex	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01726	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0022857	transmembrane transporter activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01726	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class Membrane proteins Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae02010	ABC transporters	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
ProSiteProfiles	PS50928	ABC transporter integral membrane type-1 domain profile.	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	13	213	16.898
Gene3D	G3DSA:1.10.3720.10		IPR035906	MetI-like superfamily	1	223	3.8E-49
SUPERFAMILY	SSF161098		IPR035906	MetI-like superfamily	9	206	5.76E-39
CDD	cd06261	TM_PBP2	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	27	178	7.82364E-15
TIGRFAM	TIGR01726	HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family	IPR010065	Amino acid ABC transporter, permease protein, 3-TM domain	8	115	6.8E-20
Pfam	PF00528	Binding-protein-dependent transport system inner membrane component	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	28	220	2.3E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.