Pseudomonas aeruginosa PAO1, PA1176 (napF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0009325 nitrate reductase complex
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 15371424 Reviewed by curator
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd10564
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Nitrogen metabolism ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF12838 4Fe-4S dicluster domain IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain 31 76 1.0E-6
CDD cd10564 NapF_like IPR004496 Ferredoxin-type protein NapF 18 154 4.31732E-56
Pfam PF12838 4Fe-4S dicluster domain IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain 101 148 6.3E-9
PANTHER PTHR43687 ADENYLYLSULFATE REDUCTASE, BETA SUBUNIT - - 61 121 1.1E-10
FunFam G3DSA:3.30.70.20:FF:000025 Ferredoxin-type protein NapF - - 88 157 3.9E-33
Gene3D G3DSA:3.30.70.20 - - - 90 161 1.3E-9
Gene3D G3DSA:3.30.70.20 - - - 27 78 1.1E-8
Hamap MF_02201 Ferredoxin-type protein NapF [napF]. IPR004496 Ferredoxin-type protein NapF 21 155 21.950979
NCBIfam TIGR00402 JCVI: ferredoxin-type protein NapF IPR004496 Ferredoxin-type protein NapF 18 149 5.5E-31
SUPERFAMILY SSF54862 4Fe-4S ferredoxins - - 28 151 9.77E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.