Pseudomonas aeruginosa PAO1, PA1285

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00347
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00347
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00598 Bacterial regulatory protein MarR family signature IPR000835 MarR-type HTH domain 125 145 1.3E-5
PRINTS PR00598 Bacterial regulatory protein MarR family signature IPR000835 MarR-type HTH domain 95 111 1.3E-5
Pfam PF12802 MarR family IPR000835 MarR-type HTH domain 42 98 9.4E-11
SMART SM00347 IPR000835 MarR-type HTH domain 36 135 1.4E-11
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 13 146 4.18E-30
ProSiteProfiles PS50995 MarR-type HTH domain profile. IPR000835 MarR-type HTH domain 16 147 21.249
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 14 148 2.5E-33
PRINTS PR00598 Bacterial regulatory protein MarR family signature IPR000835 MarR-type HTH domain 60 76 1.3E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.