Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Cellular Component | GO:0005829 | cytosol | Non-traceable Author Statement | ECO:0000303 non-traceable author statement used in manual assertion |
18086184 | Reviewed by curator |
Biological Process | GO:0034756 | regulation of iron ion transport | Inferred from Sequence or Structural Similarity | ECO:0000250 sequence similarity evidence used in manual assertion |
18086184 | Reviewed by curator |
Molecular Function | GO:0016987 | sigma factor activity | Inferred from Sequence or Structural Similarity | ECO:0000250 sequence similarity evidence used in manual assertion |
18086184 | Reviewed by curator |
Biological Process | GO:0006352 | DNA-templated transcription, initiation |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0016987 | sigma factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SUPERFAMILY | SSF88659 | Sigma3 and sigma4 domains of RNA polymerase sigma factors | IPR013324 | RNA polymerase sigma factor, region 3/4-like | 177 | 240 | 6.76E-14 |
PANTHER | PTHR43133 | RNA POLYMERASE ECF-TYPE SIGMA FACTO | IPR039425 | RNA polymerase sigma-70 like | 81 | 242 | 1.9E-29 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 178 | 241 | 3.3E-16 |
NCBIfam | TIGR02937 | JCVI: sigma-70 family RNA polymerase sigma factor | IPR014284 | RNA polymerase sigma-70 like domain | 85 | 239 | 2.8E-19 |
SUPERFAMILY | SSF88946 | Sigma2 domain of RNA polymerase sigma factors | IPR013325 | RNA polymerase sigma factor, region 2 | 86 | 164 | 3.06E-6 |
CDD | cd06171 | Sigma70_r4 | - | - | 183 | 236 | 3.46492E-7 |
Pfam | PF08281 | Sigma-70, region 4 | IPR013249 | RNA polymerase sigma factor 70, region 4 type 2 | 183 | 235 | 1.8E-14 |
Gene3D | G3DSA:1.10.1740.10 | - | - | - | 82 | 153 | 7.3E-6 |