Pseudomonas aeruginosa PAO1, PA1400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.1490.20
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Pyruvate metabolism ECO:0000037
not_recorded
PseudoCyc GLYCOLYSIS+CITRIC-ACID-PWY glycolysis + citric acid pathway 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
PseudoCAP Citrate cycle (TCA cycle) ECO:0000037
not_recorded
PseudoCyc ASPBIO-PWY aspartate biosynthesis II 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF51246 Rudiment single hybrid motif IPR011054 Rudiment single hybrid motif 338 457 6.28E-30
Gene3D G3DSA:3.40.50.20 - - - 1 133 9.4E-48
SUPERFAMILY SSF52096 ClpP/crotonase IPR029045 ClpP/crotonase-like domain superfamily 807 1075 1.1E-66
Gene3D G3DSA:2.40.50.100 - - - 492 559 1.1E-16
SUPERFAMILY SSF51230 Single hybrid motif IPR011053 Single hybrid motif 486 558 4.19E-15
SUPERFAMILY SSF52096 ClpP/crotonase IPR029045 ClpP/crotonase-like domain superfamily 581 838 1.33E-48
Pfam PF00364 Biotin-requiring enzyme IPR000089 Biotin/lipoyl attachment 493 555 5.3E-12
CDD cd06850 biotinyl_domain - - 492 557 1.04463E-20
Gene3D G3DSA:3.90.226.10 - - - 842 1095 3.5E-76
Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain 117 327 1.4E-57
Gene3D G3DSA:3.90.226.10 - - - 561 834 2.9E-75
PANTHER PTHR48095 PYRUVATE CARBOXYLASE SUBUNIT A - - 3 533 0.0
Gene3D G3DSA:3.30.470.20 - - - 206 462 6.9E-95
Pfam PF00289 Biotin carboxylase, N-terminal domain IPR005481 Biotin carboxylase-like, N-terminal domain 5 112 4.2E-39
SUPERFAMILY SSF56059 Glutathione synthetase ATP-binding domain-like - - 85 334 1.94E-56
SUPERFAMILY SSF52440 PreATP-grasp domain IPR016185 Pre-ATP-grasp domain superfamily 3 114 1.58E-38
Gene3D G3DSA:3.30.1490.20 - IPR013815 ATP-grasp fold, subdomain 1 134 204 8.8E-22
Pfam PF02785 Biotin carboxylase C-terminal domain IPR005482 Biotin carboxylase, C-terminal 343 451 7.1E-29
SMART SM00878 Biotin_carb_C_2 IPR005482 Biotin carboxylase, C-terminal 343 451 4.5E-46
Pfam PF01039 Carboxyl transferase domain IPR034733 Acetyl-CoA carboxylase 605 1076 7.1E-71

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.