Pseudomonas aeruginosa PAO1, PA1480 (ccmF)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0004096	catalase activity	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	16824107	Reviewed by curator
Biological Process	GO:0071977	bacterial-type flagellum-dependent swimming motility	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	16824107	Reviewed by curator
Biological Process	GO:0071978	bacterial-type flagellum-dependent swarming motility	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	16824107	Reviewed by curator
Biological Process	GO:0002049	pyoverdine biosynthetic process	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	16824107	Reviewed by curator
Biological Process	GO:0043107	type IV pilus-dependent motility	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	16824107	Reviewed by curator
Biological Process	GO:0017004	cytochrome complex assembly	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	7635817	Reviewed by curator
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01410	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0020037	heme binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01578	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0015232	heme transmembrane transporter activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01410	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0017004	cytochrome complex assembly	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01578	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0015886	heme transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01410	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR01410	Cytochrome c-type biogenesis protein signature	IPR003567	Cytochrome c-type biogenesis protein	211	237	2.6E-97
PRINTS	PR01410	Cytochrome c-type biogenesis protein signature	IPR003567	Cytochrome c-type biogenesis protein	311	330	2.6E-97
Pfam	PF01578	Cytochrome C assembly protein	IPR002541	Cytochrome c assembly protein	89	296	7.8E-56
NCBIfam	TIGR00353	JCVI: heme lyase CcmF/NrfE family subunit	IPR003568	Cytochrome c-type biogenesis protein CcmF	53	639	0.0
PRINTS	PR01411	Cytochrome c-type biogenesis protein CcmF signature	IPR003568	Cytochrome c-type biogenesis protein CcmF	352	369	3.8E-65
PRINTS	PR01411	Cytochrome c-type biogenesis protein CcmF signature	IPR003568	Cytochrome c-type biogenesis protein CcmF	4	28	3.8E-65
PRINTS	PR01411	Cytochrome c-type biogenesis protein CcmF signature	IPR003568	Cytochrome c-type biogenesis protein CcmF	629	642	3.8E-65
PRINTS	PR01411	Cytochrome c-type biogenesis protein CcmF signature	IPR003568	Cytochrome c-type biogenesis protein CcmF	395	414	3.8E-65
PRINTS	PR01410	Cytochrome c-type biogenesis protein signature	IPR003567	Cytochrome c-type biogenesis protein	275	295	2.6E-97
Pfam	PF16327	Cytochrome c-type biogenesis protein CcmF C-terminal	IPR032523	Cytochrome c-type biogenesis protein CcmF, C-terminal	316	636	9.3E-127
PRINTS	PR01410	Cytochrome c-type biogenesis protein signature	IPR003567	Cytochrome c-type biogenesis protein	245	265	2.6E-97
PRINTS	PR01410	Cytochrome c-type biogenesis protein signature	IPR003567	Cytochrome c-type biogenesis protein	80	106	2.6E-97
PRINTS	PR01411	Cytochrome c-type biogenesis protein CcmF signature	IPR003568	Cytochrome c-type biogenesis protein CcmF	113	136	3.8E-65
PRINTS	PR01410	Cytochrome c-type biogenesis protein signature	IPR003567	Cytochrome c-type biogenesis protein	132	149	2.6E-97
PRINTS	PR01410	Cytochrome c-type biogenesis protein signature	IPR003567	Cytochrome c-type biogenesis protein	295	311	2.6E-97
PANTHER	PTHR43653	CYTOCHROME C ASSEMBLY PROTEIN-RELATED	IPR003567	Cytochrome c-type biogenesis protein	206	573	0.0
PRINTS	PR01411	Cytochrome c-type biogenesis protein CcmF signature	IPR003568	Cytochrome c-type biogenesis protein CcmF	190	205	3.8E-65
PRINTS	PR01411	Cytochrome c-type biogenesis protein CcmF signature	IPR003568	Cytochrome c-type biogenesis protein CcmF	314	329	3.8E-65
PRINTS	PR01410	Cytochrome c-type biogenesis protein signature	IPR003567	Cytochrome c-type biogenesis protein	160	182	2.6E-97

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.