Pseudomonas aeruginosa PAO1, PA3610 (potD)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006810	transport	ISS Inferred from Sequence or Structural Similarity	ECO:0000044 sequence similarity evidence
Biological Process	GO:0015847	putrescine transport	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	8416922	Reviewed by curator
Cellular Component	GO:0042597	periplasmic space	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF019574	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0015846	polyamine transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF019574	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0019808	polyamine binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF019574	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae02010	ABC transporters	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	27	43	7.0E-41
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	43	64	7.0E-41
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	299	325	7.0E-41
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	86	99	7.0E-41
CDD	cd13590	PBP2_PotD_PotF_like	-	-	24	348	8.35101E-127
PIRSF	PIRSF019574	Periplasmic_polyamine_BP	IPR001188	Spermidine/putrescine-binding periplasmic protein	1	354	2.9E-99
Gene3D	G3DSA:3.40.190.10	-	-	-	126	349	8.5E-107
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	117	133	7.0E-41
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	204	223	7.0E-41
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	167	186	7.0E-41
Gene3D	G3DSA:3.40.190.10	-	-	-	24	321	8.5E-107
SUPERFAMILY	SSF53850	Periplasmic binding protein-like II	-	-	22	352	2.45E-83
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	145	159	7.0E-41
Pfam	PF13416	Bacterial extracellular solute-binding protein	IPR006059	Bacterial extracellular solute-binding protein	38	319	1.0E-31
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	254	273	7.0E-41
PANTHER	PTHR30222	SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN	-	-	7	351	1.4E-80
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	70	84	7.0E-41

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.