Pseudomonas aeruginosa PAO1, PA3656 (rpsB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003735	structural constituent of ribosome	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	2459390	Reviewed by curator
Biological Process	GO:0044267	cellular protein metabolic process	ISS Inferred from Sequence or Structural Similarity	ECO:0000044 sequence similarity evidence
Biological Process	GO:0006412	translation	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00395	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0005840	ribosome	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00395	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003735	structural constituent of ribosome	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00395	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0015935	small ribosomal subunit	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01011	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae03010	Ribosome	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.10.287.610	Helix hairpin bin	-	-	105	150	1.2E-22
PRINTS	PR00395	Ribosomal protein S2 signature	IPR001865	Small ribosomal subunit protein uS2	175	186	1.2E-37
Hamap	MF_00291_B	30S ribosomal protein S2 [rpsB].	IPR005706	Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid	2	225	41.671169
PRINTS	PR00395	Ribosomal protein S2 signature	IPR001865	Small ribosomal subunit protein uS2	158	175	1.2E-37
PRINTS	PR00395	Ribosomal protein S2 signature	IPR001865	Small ribosomal subunit protein uS2	196	210	1.2E-37
Pfam	PF00318	Ribosomal protein S2	IPR001865	Small ribosomal subunit protein uS2	9	224	4.1E-94
SUPERFAMILY	SSF52313	Ribosomal protein S2	IPR023591	Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily	6	231	4.45E-96
Gene3D	G3DSA:3.40.50.10490	-	-	-	7	245	6.9E-73
PRINTS	PR00395	Ribosomal protein S2 signature	IPR001865	Small ribosomal subunit protein uS2	37	46	1.2E-37
FunFam	G3DSA:1.10.287.610:FF:000001	30S ribosomal protein S2	-	-	102	151	9.4E-23
PANTHER	PTHR12534	30S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR	IPR005706	Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid	2	240	7.8E-74
CDD	cd01425	RPS2	IPR001865	Small ribosomal subunit protein uS2	9	223	2.54445E-106
PRINTS	PR00395	Ribosomal protein S2 signature	IPR001865	Small ribosomal subunit protein uS2	87	104	1.2E-37
PRINTS	PR00395	Ribosomal protein S2 signature	IPR001865	Small ribosomal subunit protein uS2	6	24	1.2E-37
NCBIfam	TIGR01011	JCVI: 30S ribosomal protein S2	IPR005706	Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid	4	226	3.1E-105

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.