Pseudomonas aeruginosa PAO1, PA3805 (pilF)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006928	movement of cell or subcellular component	IDA Inferred from Direct Assay	ECO:0000002 direct assay evidence
Biological Process	GO:0043107	type IV pilus-dependent motility	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	18776008	Reviewed by curator
Biological Process	GO:0006928	movement of cell or subcellular component	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	23547883	Reviewed by curator
Biological Process	GO:0046903	secretion	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	18776008	Reviewed by curator
Biological Process	GO:0009297	pilus assembly	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	8973346	Reviewed by curator
Biological Process	GO:0043683	type IV pilus biogenesis	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	8973346	Reviewed by curator
Biological Process	GO:0009297	pilus assembly	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	23547883	Reviewed by curator
Biological Process	GO:0043683	type IV pilus biogenesis	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	18776008	Reviewed by curator
Biological Process	GO:0009297	pilus assembly	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	18776008	Reviewed by curator
Biological Process	GO:0043107	type IV pilus-dependent motility	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	8973346	Reviewed by curator
Biological Process	GO:0043683	type IV pilus biogenesis	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	23547883	Reviewed by curator
Molecular Function	GO:0030911	TPR domain binding	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	23547883	Reviewed by curator
Biological Process	GO:0043107	type IV pilus-dependent motility	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	23547883	Reviewed by curator
Molecular Function	GO:0005515	protein binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00028	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class Motility & Attachment Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
PseudoCAP		Pilin biosynthesis		ECO:0000037 not_recorded

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF13414	TPR repeat	-	-	47	82	9.0E-7
Pfam	PF13424	Tetratricopeptide repeat	-	-	105	172	1.6E-8
NCBIfam	TIGR02521	JCVI: type IV pilus biogenesis/stability protein PilW	IPR013360	Pilus biogenesis/stability type IV, PilW	10	240	1.6E-73
SMART	SM00028	tpr_5	IPR019734	Tetratricopeptide repeat	71	104	42.0
SMART	SM00028	tpr_5	IPR019734	Tetratricopeptide repeat	141	174	5.2E-4
FunFam	G3DSA:1.25.40.10:FF:001817	Type 4 fimbrial biogenesis protein PilF	-	-	33	251	9.8E-120
SUPERFAMILY	SSF48452	TPR-like	IPR011990	Tetratricopeptide-like helical domain superfamily	38	203	1.4E-24
PANTHER	PTHR44186	-	-	-	35	203	5.1E-17
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	IPR011990	Tetratricopeptide-like helical domain superfamily	32	252	1.4E-60
SMART	SM00028	tpr_5	IPR019734	Tetratricopeptide repeat	37	70	0.003

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.