Pseudomonas aeruginosa PAO1, PA3828 (lptF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015921 lipopolysaccharide export
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:P0AF98
 ECO:0000250
sequence similarity evidence used in manual assertion		 18375759 Reviewed by curator
Molecular Function GO:0042626 ATPase-coupled transmembrane transporter activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:P0AF98
 ECO:0000250
sequence similarity evidence used in manual assertion		 23138981 Reviewed by curator
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR04407
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR04407
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR33529
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF03739 Lipopolysaccharide export system permease LptF/LptG IPR005495 Permease LptG/LptF-related 5 352 1.4E-66
PANTHER PTHR33529 SLR0882 PROTEIN-RELATED IPR005495 Permease LptG/LptF-related 1 354 4.4E-71
NCBIfam TIGR04407 JCVI: LPS export ABC transporter permease LptF IPR030922 LPS export ABC transporter permease LptF 2 353 3.8E-118

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.