Pseudomonas aeruginosa PAO1, PA3840

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.50.150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006364 rRNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01848
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01848
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008168 methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF05971
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008988 rRNA (adenine-N6-)-methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01848
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. IPR016909 Ribosomal RNA large subunit methyltransferase F 16 316 55.287373
MobiDBLite mobidb-lite consensus disorder prediction - - 1 24 -
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 50 314 8.0E-74
FunFam G3DSA:3.40.50.150:FF:000045 Ribosomal RNA large subunit methyltransferase F - - 49 314 8.9E-128
CDD cd02440 AdoMet_MTases - - 120 223 9.51541E-5
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 54 313 1.49E-30
PIRSF PIRSF029038 Mtase_YbiN IPR016909 Ribosomal RNA large subunit methyltransferase F 6 326 0.0
PANTHER PTHR13393 SAM-DEPENDENT METHYLTRANSFERASE IPR010286 METTL16/RlmF family 19 319 2.5E-88
Pfam PF05971 RNA methyltransferase IPR010286 METTL16/RlmF family 14 314 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.