Pseudomonas aeruginosa PAO1, PA3862 (dauB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Operons

Operon name: dauBAR operon (3 gene members)
Experiment Attributes
method: purification of transcriptional regulutors, DauR and ArgR. Gel retardation assasys with the regulatory region.
Locus Tag Gene Name Description Start End Strand Type
PA3862 dauB NAD(P)H-dependent anabolic L-arginine dehydrogenase, DauB 4322788 4323735 + CDS
Gene Details
PA3863 dauA FAD-dependent catabolic D-arginine dehydrogenase, DauA 4323758 4324885 + CDS
Gene Details
PA3864 dauR Transcriptional regulator of the dauBAR operon, DauR 4324948 4325580 + CDS
Gene Details
Evidence
Transcription unit experimentally validated in a strain of the same species. The start coordinate will often be based on an experimentally validated transcription start site. For protein-coding genes, unless otherwise specified, the stop will be based on the stop codon.
References
Regulation of the dauBAR operon and characterization of D-amino acid dehydrogenase DauA in arginine and lysine catabolism of Pseudomonas aeruginosa PAO1.
Li C, Yao X, Lu CD
Microbiology (Reading, Engl.) 2010 Jan;156(Pt 1):60-71
PubMed ID: 19850617
Cross-References
PseudoCAP: 41781
Operon name: dauB-dauA-dauR (3 gene members)
Locus Tag Gene Name Description Start End Strand Type
PA3862 dauB NAD(P)H-dependent anabolic L-arginine dehydrogenase, DauB 4322788 4323735 + CDS
Gene Details
PA3863 dauA FAD-dependent catabolic D-arginine dehydrogenase, DauA 4323758 4324885 + CDS
Gene Details
PA3864 dauR Transcriptional regulator of the dauBAR operon, DauR 4324948 4325580 + CDS
Gene Details
Evidence
Computationally-predicted.
References
DOOR: a database for prokaryotic operons.
Mao F, Dam P, Chou J, Olman V, Xu Y
Nucleic Acids Res. 2009 Jan;37(Database issue):D459-63
PubMed ID: 18988623
Cross-References
DOOR: 13891