Pseudomonas aeruginosa PAO1, PA3890 (opuCB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0015226	carnitine transmembrane transporter activity	ISS Inferred from Sequence or Structural Similarity Term mapped from: UniProtKB:Q87WH4	ECO:0000250 sequence similarity evidence used in manual assertion	17660277	Reviewed by curator
Biological Process	GO:0015838	amino-acid betaine transport	ISS Inferred from Sequence or Structural Similarity Term mapped from: UniProtKB:Q87WH4	ECO:0000250 sequence similarity evidence used in manual assertion	17660277	Reviewed by curator
Biological Process	GO:0031460	glycine betaine transport	ISS Inferred from Sequence or Structural Similarity Term mapped from: UniProtKB:Q87WH4	ECO:0000250 sequence similarity evidence used in manual assertion	17660277	Reviewed by curator
Cellular Component	GO:0043190	ATP-binding cassette (ABC) transporter complex	ISS Inferred from Sequence or Structural Similarity Term mapped from: UniProtKB:Q87WH4	ECO:0000250 sequence similarity evidence used in manual assertion	17660277	Reviewed by curator
Cellular Component	GO:1902495	transmembrane transporter complex	ISS Inferred from Sequence or Structural Similarity Term mapped from: UniProtKB:Q87WH4	ECO:0000250 sequence similarity evidence used in manual assertion	17660277	Reviewed by curator
Biological Process	GO:0071475	cellular hyperosmotic salinity response	ISS Inferred from Sequence or Structural Similarity Term mapped from: UniProtKB:Q87WH4	ECO:0000250 sequence similarity evidence used in manual assertion	17660277	Reviewed by curator
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06261	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06261	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class Membrane proteins Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae02010	ABC transporters	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF161098	MetI-like	IPR035906	MetI-like superfamily	12	203	4.84E-36
PANTHER	PTHR30177	GLYCINE BETAINE/L-PROLINE TRANSPORT SYSTEM PERMEASE PROTEIN PROW	-	-	10	216	4.7E-66
FunFam	G3DSA:1.10.3720.10:FF:000001	Glycine betaine ABC transporter, permease	-	-	12	210	4.4E-69
Pfam	PF00528	Binding-protein-dependent transport system inner membrane component	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	37	213	6.6E-20
Gene3D	G3DSA:1.10.3720.10	-	IPR035906	MetI-like superfamily	14	212	3.5E-31
CDD	cd06261	TM_PBP2	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	34	198	1.08791E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.