Pseudomonas aeruginosa PAO1, PA4010

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50486
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006284 base-excision repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00527
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003905 alkylbase DNA N-glycosylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00527
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00527
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae03410 Base excision repair 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF50486 FMT C-terminal domain-like IPR011034 Formyl transferase-like, C-terminal domain superfamily 15 220 2.43E-53
Pfam PF02245 Methylpurine-DNA glycosylase (MPG) IPR003180 Methylpurine-DNA glycosylase 21 206 2.4E-36
CDD cd00540 AAG IPR003180 Methylpurine-DNA glycosylase 21 213 3.25094E-60
Gene3D G3DSA:3.10.300.10 - IPR036995 Methylpurine-DNA glycosylase superfamily 12 216 6.3E-43
FunFam G3DSA:3.10.300.10:FF:000003 Putative 3-methyladenine DNA glycosylase - - 12 216 0.0
PANTHER PTHR10429 DNA-3-METHYLADENINE GLYCOSYLASE IPR003180 Methylpurine-DNA glycosylase 10 207 1.1E-35
Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. IPR003180 Methylpurine-DNA glycosylase 19 213 25.906982

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.