Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0051188 | obsolete cofactor biosynthetic process | Inferred from Sequence or Structural Similarity | ECO:0000044 sequence similarity evidence |
||
Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF52922
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0016114 | terpenoid biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00204
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00204
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
PseudoCyc | PWY-6892 | thiazole biosynthesis I (E. coli) | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
KEGG | pae01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pae00730 | Thiamine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
PseudoCyc | NONMEVIPP-PWY | methylerythritol phosphate pathway I | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
KEGG | pae00900 | Terpenoid backbone biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
PseudoCyc | THISYN-PWY | superpathway of thiamin diphosphate biosynthesis I | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
KEGG | pae01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pae01130 | Biosynthesis of antibiotics | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
PseudoCyc | PYRIDOXSYN-PWY | pyridoxal 5'-phosphate biosynthesis I | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
CDD | cd02007 | TPP_DXS | IPR005477 | Deoxyxylulose-5-phosphate synthase | 54 | 295 | 5.54859E-123 |
Pfam | PF02780 | Transketolase, C-terminal domain | IPR033248 | Transketolase, C-terminal domain | 500 | 616 | 4.1E-27 |
Hamap | MF_00315 | 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. | IPR005477 | Deoxyxylulose-5-phosphate synthase | 17 | 625 | 46.223408 |
SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | IPR029061 | Thiamin diphosphate-binding fold | 321 | 508 | 1.23E-56 |
Gene3D | G3DSA:3.40.50.970 | - | - | - | 323 | 491 | 4.2E-54 |
FunFam | G3DSA:3.40.50.970:FF:000005 | 1-deoxy-D-xylulose-5-phosphate synthase | - | - | 323 | 490 | 1.3E-79 |
NCBIfam | TIGR00204 | JCVI: 1-deoxy-D-xylulose-5-phosphate synthase | IPR005477 | Deoxyxylulose-5-phosphate synthase | 22 | 624 | 0.0 |
Pfam | PF13292 | 1-deoxy-D-xylulose-5-phosphate synthase | IPR005477 | Deoxyxylulose-5-phosphate synthase | 18 | 289 | 2.3E-121 |
Gene3D | G3DSA:3.40.50.920 | - | IPR009014 | Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II | 500 | 625 | 6.4E-37 |
SMART | SM00861 | Transket_pyr_3 | IPR005475 | Transketolase-like, pyrimidine-binding domain | 324 | 488 | 8.8E-63 |
SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | IPR029061 | Thiamin diphosphate-binding fold | 15 | 386 | 7.41E-77 |
PANTHER | PTHR43322 | 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATED | IPR005477 | Deoxyxylulose-5-phosphate synthase | 9 | 626 | 0.0 |
CDD | cd07033 | TPP_PYR_DXS_TK_like | - | - | 329 | 482 | 4.33512E-69 |
Gene3D | G3DSA:3.40.50.970 | - | - | - | 11 | 298 | 8.3E-83 |
FunFam | G3DSA:3.40.50.920:FF:000002 | 1-deoxy-D-xylulose-5-phosphate synthase | - | - | 500 | 625 | 6.5E-44 |
Pfam | PF02779 | Transketolase, pyrimidine binding domain | IPR005475 | Transketolase-like, pyrimidine-binding domain | 325 | 485 | 1.9E-36 |
SUPERFAMILY | SSF52922 | TK C-terminal domain-like | IPR009014 | Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II | 496 | 625 | 2.62E-33 |