Pseudomonas aeruginosa PAO1, PA4048
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF13975 | gag-polyprotein putative aspartyl protease | - | - | 107 | 198 | 1.8E-26 |
| CDD | cd05483 | retropepsin_like_bacteria | IPR034122 | Retropepsin-like domain, bacterial | 102 | 197 | 3.555E-30 |
| SUPERFAMILY | SSF50630 | Acid proteases | IPR021109 | Aspartic peptidase domain superfamily | 98 | 201 | 3.5E-20 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | IPR021109 | Aspartic peptidase domain superfamily | 87 | 214 | 1.2E-31 |
| NCBIfam | TIGR02281 | JCVI: TIGR02281 family clan AA aspartic protease | IPR011969 | Clan AA aspartic peptidase, C-terminal | 94 | 211 | 4.8E-42 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.