Pseudomonas aeruginosa PAO1, PA4070

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00032	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00032	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0043565	sequence-specific DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF12833	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF12833	Helix-turn-helix domain	IPR018060	DNA binding HTH domain, AraC-type	231	311	6.8E-19
PANTHER	PTHR46796	HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS-RELATED	-	-	62	312	1.1E-24
PRINTS	PR00032	AraC bacterial regulatory protein HTH signature	IPR020449	Transcription regulator HTH, AraC- type	294	310	1.8E-7
SMART	SM00342	aracneu4	IPR018060	DNA binding HTH domain, AraC-type	225	310	1.5E-26
SUPERFAMILY	SSF46689	Homeodomain-like	IPR009057	Homeobox-like domain superfamily	262	312	2.24E-10
Pfam	PF14525	AraC-binding-like domain	IPR035418	Transcription regulator HTH, AraC- type, ligand binding domain-like	14	165	1.0E-10
PRINTS	PR00032	AraC bacterial regulatory protein HTH signature	IPR020449	Transcription regulator HTH, AraC- type	279	294	1.8E-7
Gene3D	G3DSA:1.10.10.60	-	-	-	206	313	1.4E-26

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.