Pseudomonas aeruginosa PAO1, PA4084 (cupB3)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13954
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009297 pilus assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30451
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015473 fimbrial usher porin activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30451
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30451
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Motility & Attachment Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF141729 FimD N-terminal domain-like IPR037224 PapC, N-terminal domain superfamily 17 145 8.89E-24
Gene3D G3DSA:3.10.20.410 - IPR037224 PapC, N-terminal domain superfamily 17 147 1.1E-21
Pfam PF13954 PapC N-terminal domain IPR025885 PapC, N-terminal domain 19 172 2.8E-37
Gene3D G3DSA:2.60.40.3110 - - - 257 346 1.2E-32
Gene3D G3DSA:2.60.40.2070 - IPR043142 PapC-like, C-terminal domain superfamily 753 841 6.3E-17
Pfam PF00577 Outer membrane usher protein IPR000015 Outer membrane usher protein 187 743 0.0
Gene3D G3DSA:2.60.40.2610 Outer membrane usher protein FimD, plug domain IPR042186 Outer membrane usher protein FimD, plug domain 661 749 2.3E-23
MobiDBLite mobidb-lite consensus disorder prediction - - 609 623 -
Pfam PF13953 PapC C-terminal domain IPR025949 PapC-like, C-terminal domain 754 819 2.6E-18
MobiDBLite mobidb-lite consensus disorder prediction - - 581 597 -
FunFam G3DSA:2.60.40.3110:FF:000001 Putative fimbrial outer membrane usher - - 257 346 8.5E-33
MobiDBLite mobidb-lite consensus disorder prediction - - 607 627 -
MobiDBLite mobidb-lite consensus disorder prediction - - 581 600 -
PANTHER PTHR30451 OUTER MEMBRANE USHER PROTEIN IPR000015 Outer membrane usher protein 11 831 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.