Pseudomonas aeruginosa PAO1, PA4115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
Shine-Dalgarno sequence 4602094 4602096 - ECO:0000256
match to sequence model evidence used in automatic assertion 		Details
Shine-Dalgarno sequence 4602493 4602495 + ECO:0000256
match to sequence model evidence used in automatic assertion 		Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
LasR/RhlR box 4603858 4603873 +
18248420 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
-35 region 4603908 4603913 +
Details
RpoS binding site 4603908 4603937 +
Details
-10 region 4603931 4603937 +
Details
transcriptional initiation site (+1) 4603945 4603945 +
Details
transcription initiation site 4603946 4603946 +
18248420 Details
-10 element (RpoS) 4603932 4603938 +
18248420 Details
-35 element (RpoS) 4603909 4603915 +
18248420 Details
Rho-independent transcription terminator TERM 1058 4603900 4603932 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		17313685 Details
Rho-independent transcription terminator TERM 1059 4603901 4603931 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		17313685 Details