Pseudomonas aeruginosa PAO1, PA4124 (hpcB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015976 carbon utilization
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0044248 cellular catabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0008198 ferrous iron binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02900
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02900
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006725 cellular aromatic compound metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02900
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008687 3,4-dihydroxyphenylacetate 2,3-dioxygenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07370
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Aromatic compound catabolism ECO:0000037
not_recorded
KEGG pae01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 4-hydroxyphenylacetate degradation 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae00350 Tyrosine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01220 Degradation of aromatic compounds 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR02298 JCVI: 3,4-dihydroxyphenylacetate 2,3-dioxygenase IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 282 0.0
CDD cd07370 HPCD IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase 3 282 0.0
PANTHER PTHR30096 UNCHARACTERIZED - - 14 280 4.7E-22
Gene3D G3DSA:3.40.830.10 - - - 3 281 3.2E-61
Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B 7 280 1.0E-79
SUPERFAMILY SSF53213 LigB-like - - 12 280 5.1E-50

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.