Pseudomonas aeruginosa PAO1, PA4228 (pchD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Operons

Operon name: pchDCBA (4 gene members)
Experiment Attributes
method: Northern blot
Locus Tag Gene Name Description Start End Strand Type
PA4228 pchD pyochelin biosynthesis protein PchD 4742424 4744067 + CDS
Gene Details
PA4229 pchC pyochelin biosynthetic protein PchC 4744064 4744819 + CDS
Gene Details
PA4230 pchB salicylate biosynthesis protein PchB 4744819 4745124 + CDS
Gene Details
PA4231 pchA salicylate biosynthesis isochorismate synthase 4745121 4746551 + CDS
Gene Details
Evidence
Transcription unit experimentally validated in a strain of the same species. The start coordinate will often be based on an experimentally validated transcription start site. For protein-coding genes, unless otherwise specified, the stop will be based on the stop codon.
References
Biosynthesis of pyochelin and dihydroaeruginoic acid requires the iron-regulated pchDCBA operon in Pseudomonas aeruginosa.
Serino L, Reimmann C, Visca P, Beyeler M, Chiesa VD, Haas D
J. Bacteriol. 1997 Jan;179(1):248-57
PubMed ID: 8982005
Cross-References
PseudoCAP: 41735
Operon name: pchD-pchC-pchB-pchA (4 gene members)
Locus Tag Gene Name Description Start End Strand Type
PA4228 pchD pyochelin biosynthesis protein PchD 4742424 4744067 + CDS
Gene Details
PA4229 pchC pyochelin biosynthetic protein PchC 4744064 4744819 + CDS
Gene Details
PA4230 pchB salicylate biosynthesis protein PchB 4744819 4745124 + CDS
Gene Details
PA4231 pchA salicylate biosynthesis isochorismate synthase 4745121 4746551 + CDS
Gene Details
Evidence
Computationally-predicted.
References
DOOR: a database for prokaryotic operons.
Mao F, Dam P, Chou J, Olman V, Xu Y
Nucleic Acids Res. 2009 Jan;37(Database issue):D459-63
PubMed ID: 18988623
Cross-References
DOOR: 13967
Operon name: pchDCBA (4 gene members)
Experiment Attributes
method: Northern blot
Locus Tag Gene Name Description Start End Strand Type
PA4228 pchD pyochelin biosynthesis protein PchD 4742424 4744067 + CDS
Gene Details
PA4229 pchC pyochelin biosynthetic protein PchC 4744064 4744819 + CDS
Gene Details
PA4230 pchB salicylate biosynthesis protein PchB 4744819 4745124 + CDS
Gene Details
PA4231 pchA salicylate biosynthesis isochorismate synthase 4745121 4746551 + CDS
Gene Details
Evidence
Transcription unit experimentally validated in a strain of the same species. The start coordinate will often be based on an experimentally validated transcription start site. For protein-coding genes, unless otherwise specified, the stop will be based on the stop codon.
References
Biosynthesis of pyochelin and dihydroaeruginoic acid requires the iron-regulated pchDCBA operon in Pseudomonas aeruginosa.
Serino L, Reimmann C, Visca P, Beyeler M, Chiesa VD, Haas D
J. Bacteriol. 1997 Jan;179(1):248-57
PubMed ID: 8982005
Cross-References
PseudoCAP: 41736