Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4272
|
Name |
rplJ
|
Replicon | chromosome |
Genomic location | 4781286 - 4781786 (- strand) |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_252962.1 |
GI | 15599468 |
Affymetrix | PA4272_rplJ_at |
DNASU | PaCD00007854 |
Entrez | 881702 |
GenBank | AAG07660.1 |
INSDC | AAG07660.1 |
NCBI Locus Tag | PA4272 |
protein_id(GenBank) | gb|AAG07660.1|AE004843_2|gnl|PseudoCAP|PA4272 |
TIGR | NTL03PA04273 |
UniParc | UPI0000133B45 |
UniProtKB Acc | Q9HWC7 |
UniProtKB ID | RL10_PSEAE |
UniRef100 | UniRef100_A6UZH9 |
UniRef50 | UniRef50_P44350 |
UniRef90 | UniRef90_Q889Y0 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
50S ribosomal protein L10
|
Synonyms | |
Evidence for Translation |
Detected by two-dimensional gel electrophoresis and protein mass mapping(PMID:21863142).
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 2.23 |
Kyte-Doolittle Hydrophobicity Value | 0.096 |
Molecular Weight (kDa) | 17.6 |
Isoelectric Point (pI) | 9.53 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
7UNU | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 100.0 |
7UNV | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.7 | ELECTRON MICROSCOPY | 100.0 |
7UNW | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.6 | ELECTRON MICROSCOPY | 100.0 |
7UNR | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 576 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001439 (534 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4272
Search term: rplJ
Search term: 50S ribosomal protein L10
|
The primary structure of protein L10 from Escherichia coli ribosomes.
Dovgas NV, Vinokurov LM, Velmoga IS, Alakhov YB, Ovchinnikov YA
FEBS Lett 1976 Aug 1;67(1):58-61
PubMed ID: 782920
|
Nucleotide sequence of the ribosomal protein gene cluster adjacent to the gene for RNA polymerase subunit beta in Escherichia coli.
Post LE, Strycharz GD, Nomura M, Lewis H, Dennis PP
Proc Natl Acad Sci U S A 1979 Apr;76(4):1697-701
PubMed ID: 377281
|
Feedback regulation of the rplJL-rpoBC ribosomal protein operon of Escherichia coli requires a region of mRNA secondary structure.
Climie SC, Friesen JD
J Mol Biol 1987 Dec 5;198(3):371-81
PubMed ID: 2448482
|
Comparisons of Two Proteomic Analyses of Non-Mucoid and Mucoid Pseudomonas aeruginosa Clinical Isolates from a Cystic Fibrosis Patient.
Rao J, Damron FH, Basler M, Digiandomenico A, Sherman NE, Fox JW, Mekalanos JJ, Goldberg JB
Front Microbiol 2011;2:162
PubMed ID: 21863142
|