Pseudomonas aeruginosa PAO1, PA4471
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Fur box | 5000320 | 5000338 | - |
|
9045799 | Details |
| transcriptional initiation site (+1) | 5000323 | 5000323 | - |
|
9045799 | Details |
| Fur box | 5000326 | 5000344 | - |
|
9045799 | Details |
| putative Fur binding site at fumC | 5000321 | 5000339 | - |
|
11812853 | Details |
| Fur protected fragment at fagA | 5000310 | 5000346 | - |
|
9045799 | Details |
| Iron box 1 of fagA-fumC-orfX-sodA operon | 5000327 | 5000345 | - |
|
9045799 | Details |
| Iron box 2 of fagA-fumC-orfX-sodA operon | 5000321 | 5000339 | - |
|
9045799 | Details |
| pig3 Fur-box element1 | 5000321 | 5000339 | + |
|
8633080 | Details |
| pig3 Fur-box element2 | 5000327 | 5000345 | - |
|
8633080 | Details |
| ofrY-fumC-orfX-sodA promoter | 5000325 | 5000374 | - |
|
Details | |
| 1st Fur-retarded fragment at orfY-fumC-orfX-sodA | 5000462 | 5000661 | + |
|
Details | |
| transcription initiation site | 5000329 | 5000329 | - |
|
8806672 | Details |
| Fur-box | 5000321 | 5000340 | - |
|
8806672 | Details |
| Fur binding site | 5000327 | 5000345 | - |
ECO:0000314
direct assay evidence used in manual assertion |
8633080 | Details |
| Fur binding site | 5000321 | 5000339 | + |
ECO:0000314
direct assay evidence used in manual assertion |
9045799 | Details |
| Fur binding site | 5000321 | 5000340 | - |
ECO:0000314
direct assay evidence used in manual assertion |
15175299 | Details |
| Inverted repeat: AACGCCAGCG-N5-CGCTGGCGTT | 5000407 | 5000431 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1157 | 5000409 | 5000429 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| transcriptional initiation site (+1) | 4999924 | 4999924 | - |
|
9045799 | Details |
| transcriptional initiation site (+1) | 4999926 | 4999926 | - |
|
9045799 | Details |
| transcriptional initiation site (+1) | 5000017 | 5000017 | - |
|
9045799 | Details |
| Inverted repeat: CTGGCGCAGCC-N72-GGCTGCGCCAG | 4999990 | 5000083 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |