Pseudomonas aeruginosa PAO1, PA4516

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.25.40.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF08238 Sel1 repeat IPR006597 Sel1-like repeat 148 183 4.7E-6
PANTHER PTHR43628 ACTIVATOR OF C KINASE PROTEIN 1-RELATED - - 70 182 7.4E-34
Pfam PF08238 Sel1 repeat IPR006597 Sel1-like repeat 202 215 140.0
SMART SM00671 sel1 IPR006597 Sel1-like repeat 76 111 6.6E-5
Pfam PF08238 Sel1 repeat IPR006597 Sel1-like repeat 236 250 0.77
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain IPR011990 Tetratricopeptide-like helical domain superfamily 13 268 4.8E-53
Pfam PF08238 Sel1 repeat IPR006597 Sel1-like repeat 114 147 9.7E-8
Pfam PF08238 Sel1 repeat IPR006597 Sel1-like repeat 41 75 1.9E-7
SUPERFAMILY SSF81901 HCP-like - - 15 251 3.05E-44
SMART SM00671 sel1 IPR006597 Sel1-like repeat 114 147 9.3E-7
Pfam PF08238 Sel1 repeat IPR006597 Sel1-like repeat 77 110 0.061
SMART SM00671 sel1 IPR006597 Sel1-like repeat 40 75 1.2E-7
SMART SM00671 sel1 IPR006597 Sel1-like repeat 148 183 1.5E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.