Pseudomonas aeruginosa PAO1, PA4609 (radA)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006259	DNA metabolic process	ISS Inferred from Sequence or Structural Similarity	ECO:0000044 sequence similarity evidence
Biological Process	GO:0006281	DNA repair	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_01498	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_01498	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003684	damaged DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_01498	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016887	ATPase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00382	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	57	271	4.5E-43
PRINTS	PR01874	DNA repair protein radA signature	-	-	121	138	2.8E-94
Pfam	PF13481	AAA domain	-	-	74	219	1.6E-13
PRINTS	PR01874	DNA repair protein radA signature	-	-	171	195	2.8E-94
Pfam	PF18073	Rubredoxin metal binding domain	IPR041166	LapB, rubredoxin metal binding domain	8	35	1.4E-10
PANTHER	PTHR32472	DNA REPAIR PROTEIN RADA	-	-	3	452	7.0E-114
Hamap	MF_01498	DNA repair protein RadA [radA].	IPR004504	DNA repair protein RadA	21	452	43.918098
PRINTS	PR01874	DNA repair protein radA signature	-	-	10	34	2.8E-94
SUPERFAMILY	SSF54211	Ribosomal protein S5 domain 2-like	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	252	452	2.73E-40
NCBIfam	TIGR00416	JCVI: DNA repair protein RadA	IPR004504	DNA repair protein RadA	1	448	0.0
Gene3D	G3DSA:3.30.230.10	-	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	281	453	3.9E-21
CDD	cd01121	RadA_SMS_N	-	-	8	274	0.0
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	66	286	2.01E-50
PRINTS	PR01874	DNA repair protein radA signature	-	-	319	342	2.8E-94
PRINTS	PR01874	DNA repair protein radA signature	-	-	245	271	2.8E-94
PRINTS	PR01874	DNA repair protein radA signature	-	-	80	108	2.8E-94
PRINTS	PR01874	DNA repair protein radA signature	-	-	210	238	2.8E-94
FunFam	G3DSA:3.30.230.10:FF:000011	DNA repair protein RadA	-	-	296	453	5.9E-91
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	88	241	2.5E-10
FunFam	G3DSA:3.40.50.300:FF:000050	DNA repair protein RadA	-	-	60	272	7.4E-99
Pfam	PF13541	Subunit ChlI of Mg-chelatase	-	-	361	427	8.3E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.