Pseudomonas aeruginosa PAO1, PA4622
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Shine-Dalgarno sequence | 5182276 | 5182279 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GGCGCCGCGGA-N17-TCCGCGGCGCC | 5183527 | 5183565 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AAAGCCCGGC-N5-GCCGGGCTTT | 5183896 | 5183920 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1233 | 5183899 | 5183917 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 1234 | 5183899 | 5183917 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |