Pseudomonas aeruginosa PAO1, PA4768 (smpB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0044267	cellular protein metabolic process	ISS Inferred from Sequence or Structural Similarity	ECO:0000044 sequence similarity evidence
Molecular Function	GO:0003723	RNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01668	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR30308	TMRNA-BINDING COMPONENT OF TRANS-TRANSLATION TAGGING COMPLEX	IPR000037	SsrA-binding protein	1	155	1.9E-60
CDD	cd09294	SmpB	IPR000037	SsrA-binding protein	15	131	3.76914E-69
NCBIfam	TIGR00086	JCVI: SsrA-binding protein	IPR000037	SsrA-binding protein	12	154	6.8E-52
Pfam	PF01668	SmpB protein	IPR000037	SsrA-binding protein	12	154	9.7E-59
SUPERFAMILY	SSF74982	Small protein B (SmpB)	IPR023620	Small protein B	5	136	1.22E-50
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	132	159	-
Gene3D	G3DSA:2.40.280.10	-	IPR023620	Small protein B	4	133	1.3E-47
Hamap	MF_00023	SsrA-binding protein [smpB].	IPR000037	SsrA-binding protein	1	159	71.799217

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.